Warning: Please be aware that these videos are a snapshot, and as such may use an outdated version of the tutorial and/or Galaxy. Below the video you will find links to the tutorials as they appeared at the time of recording.
Warning: Please be aware that these videos are a snapshot, and as such may use an outdated version of the tutorial and/or Galaxy. Below the video you will find links to the tutorials as they appeared at the time of recording.
Generating a single cell matrix using Alevin
Below are video tutorials for this GTN material, created for various (past) events.Demo Video (February 2021)
| Description: | This tutorial will take you from raw FASTQ files to a cell x gene data matrix in AnnData format. What’s a data matrix, and what’s AnnData format? Well you’ll find out! Importantly, this is the first step in processing single cell data in order to start analysing it. |
| Length: | 30 minutes |
| Captions: | Wendi Bacon |
| Created: | 15 February 2021 |
| Materials: |
|
| Support: | |
| Supported Servers: | Known Working |
Tutorial:
