Warning: Please be aware that these videos are a snapshot, and as such may use an outdated version of the tutorial and/or Galaxy. Below the video you will find links to the tutorials as they appeared at the time of recording.
Warning: Please be aware that these videos are a snapshot, and as such may use an outdated version of the tutorial and/or Galaxy. Below the video you will find links to the tutorials as they appeared at the time of recording.
Proteogenomics 1: Database Creation
Below are video tutorials for this GTN material, created for various (past) events.Tutorial Video (February 2021)
| Description: | In this tutorial, we will provide a walkthrough on how to generate a customized protein sequence database using RNA-Seq data. The resultant FASTA database contains sequences with single amino acid variants (SAVs), insertions and deletions (indels)and transcript assemblies (splicing variants). This database can then be used to identify protein sequence variants from the mass spectrometry data. |
| Length: | 40 minutes |
| Captions: | Emma Leith |
| Created: | 15 February 2021 |
| Materials: |
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| Support: | |
| Supported Servers: | Known Working Possibly Working |
Tutorial:
