Warning: Please be aware that these videos are a snapshot, and as such may use an outdated version of the tutorial and/or Galaxy. Below the video you will find links to the tutorials as they appeared at the time of recording.
Creating Galaxy tools from Conda Through Deployment
Below are video tutorials for this GTN material, created for various (past) events.
Tutorial Video (May 2023)
Description:
The first step to adding a tool to Galaxy, is to add it to (Bio)Conda.
This tutorial will show you how to do that.
Planemo is the Galaxy tool development kit, and will make your tool
development process a lot easier! This tutorial will show you how to use
Planemo to start the tool wrapping process, and covers the general
structure of a Galaxy tool wrapper.
You are now ready to start writing your tool wrapper! This video will
show you how.
Each tool wrapper also needs a .shed.yml file, which contains some
metadata about the tool.
Here you will learn how to test Galaxy tools using Planemo.
Here you will learn how to publish tools in public tool repositories.
The first step to adding a tool to Galaxy, is to add it to (Bio)Conda.
This tutorial will show you how to do that.
Planemo is the Galaxy tool development kit, and will make your tool
development process a lot easier! This tutorial will show you how to use
Planemo to start the tool wrapping process, and covers the general
structure of a Galaxy tool wrapper.
You are now ready to start writing your tool wrapper! This video will
show you how.
Each tool wrapper also needs a .shed.yml file, which contains some
metadata about the tool.
Here you will learn how to test Galaxy tools using Planemo.
Here you will learn how to publish tools in public tool repositories.
The first step to adding a tool to Galaxy, is to add it to (Bio)Conda.
This tutorial will show you how to do that.
Planemo is the Galaxy tool development kit, and will make your tool
development process a lot easier! This tutorial will show you how to use
Planemo to start the tool wrapping process, and covers the general
structure of a Galaxy tool wrapper.
You are now ready to start writing your tool wrapper! This video will
show you how.
Each tool wrapper also needs a .shed.yml file, which contains some
metadata about the tool.
Here you will learn how to test Galaxy tools using Planemo.
Here you will learn how to publish tools in public tool repositories.
Warning: Please be aware that these videos are a snapshot, and as such may use an outdated version of the tutorial and/or Galaxy. Below the video you will find links to the tutorials as they appeared at the time of recording.
Tutorial:
