My Awesome Event (Example)
Best training since sliced bread lessons
Practical Information
- Dates
- 15-18 November 2021
- Location:
- The North Pole
- Cost:
- free
- Format:
- Asynchronous with some live Q&A sessions
- My custom Info:
Anything else you want to list in practical info section
- Supporting Institutions:
- The Galaxy Training Network, The Gallantries Project
- Contact:
- Saskia Hiltemann, Helena Rasche
- Registration
- Register Now!
Program
Below you will find all the tutorials for this course, everything you need to follow this course is listed here.Before you start
Register for a Galaxy Account
Create an account on one of the following Galaxy servers:
Join TIaaS group
Training Infrastructure as a Service (TIaaS) helps Galaxy workshops run smoothly.
Joining TIaaS will make your jobs run quicker.
Join Slack Chat!
Slack is where you can ask all your questions
- Join Slack: Invite link
- Join Channel: #event-testevent (and say Hi!)
See our Slack Tips & Tricks page for some more info about Slack and how we use it.
GalaxyProject Code of Conduct
We are committed to providing a welcoming and inspiring community for all,
and expect our code of conduct to be honored.
Please read the Code of Conduct and adhere to it throughout this event.
If you witness any violations of this code of conduct, please report it to us.
Read the full Code of Conduct
Request a certificate of attendance.
For this event, we will use the GTN Certificate Slack Bot to keep track of your progress and request your certificate. (Instructions below).
NOTE: If your country blocks Slack, then please fill in this Certificate Request Form instead.
Deadline: no later than Sunday July 24, 2022.
Certificate Requirements
- Have a registration for this event.
- Save all your Galaxy Histories.
- Register completion of tutorials using the Certificate Bot (see below).
- Answer the icebreakers question on Slack every day!
- Be active on Slack!
- Join the Slack channels for every training session you follow this week (see link below video)
- Let us know when you are starting with a session in the session's dedicated Slack channel
- Talk about the session! Get stuck? Have a question about the science? want to discuss anything? want to thank your instructors? do it in Slack!
- Whenever you finish a session, let us know what you thought of it!
- Enjoyed a tutorial? Take a moment to thank your (volunteer) instructors and speakers on Slack
- And please, feel free to help other participants on Slack if you know the answer!
- Fill out our feedback survey (see "wrap-up" section of the program). This will help us improve this event in the future.
NOTE: You can follow as few or as many training sessions as you want, we will give you a personalized certificate listing all the sessions you attended.
Using the GTN Certificate Slack Bot
- Completed a tutorial?
- Share your Galaxy history via URL
- Instructions
- The history URL will look something like:
https://usegalaxy.xx/u/saskia/h/my-history-name
- Open the Slack channel for the tutorial you finished
- The link to this channel is listed below the video
-
Submit your history URL in this channel using the command:
/completed https://link_to_your_history
- NOTE: Your message must START with /completed, you cannot write this in the middle or end of the message.
- NOTE: If a tutorial results in mulltiple histories, you can submit them all in the same command:
- example:
/completed history1_url history2_url- Write a short message in the channel letting us know what you thought of the tutorial, and/or thanking the instructors!
- Write a short message in the channel letting us know what you thought of the tutorial, and/or thanking the instructors!
- Share your Galaxy history via URL
- Want to check your submissions?
- At any time, use the /transcript command to see what you have already submitted
- In any channel, or a message to @GTN Certificate Bot
- Finished with the event? Use the command:
- /request-certificate
- to request a certificate for the course.
- Enter your name as you would like it to appear on the Certificate
- example:
/request-certificate Saskia Hiltemann
- example:
- In any channel, or a message to @GTN Certificate Bot
- We will review your Galaxy histories, and send you your personalised certificate
- We aim to do this within 2 weeks of the certificate deadline
- /request-certificate
Speaker
Day 1
your first intro
Come say Hi in Slack! Let us know you are joining today and are getting started!
Icebreaker Question
Introduce yourself and tell us your favorite science fun fact!
Post your answers in #mychannel on Slack!
Please feel free to respond to each other here, this channel is for socializing and getting to know each other! :)
In this webinar series, we cover resources for different types of Galaxy users and audiences.
In this sesssion, we will walk you through the basics of quality checking your sequencing data. This session consists of a lecture followed by a hands-on tutorial.
Quality Control (Lecture)
| Description: | This lecture goes over the concepts involved in assessing the quality of your sequencing data. |
| Length: | 40 minutes |
| Captions: | Yvonne Hiltemann, Nadia Goué, Helena Rasche |
| Created: | 15 February 2021 |
| Materials: |
|
| Support: | |
| Learning Objectives: |
|
Slides:
Quality Control (Tutorial)
| Description: | In this tutorial you will get some hand-on experience performing a quality assessment on sequencing data. |
| Length: | 50 minutes |
| Captions: | Andrew Lonsdale |
| Created: | 19 May 2023 |
| Materials: |
|
| Support: | |
| Supported Servers: | Known Working Possibly Working |
| Learning Objectives: |
|
Tutorial:
Day 2
deeper dive
In this webinar series, we cover resources for different types of Galaxy users and audiences.
In this sesssion, we will walk you through the basics of quality checking your sequencing data. This session consists of a lecture followed by a hands-on tutorial.
Quality Control (Lecture)
| Description: | This lecture goes over the concepts involved in assessing the quality of your sequencing data. |
| Length: | 40 minutes |
| Captions: | Yvonne Hiltemann, Nadia Goué, Helena Rasche |
| Created: | 15 February 2021 |
| Materials: |
|
| Support: | |
| Learning Objectives: |
|
Quality Control (Tutorial)
| Description: | In this tutorial you will get some hand-on experience performing a quality assessment on sequencing data. |
| Length: | 50 minutes |
| Captions: | Andrew Lonsdale |
| Created: | 19 May 2023 |
| Materials: |
|
| Support: | |
| Supported Servers: | Known Working Possibly Working |
| Learning Objectives: |
|
Functionally Assembled Terrestrial Ecosystem Simulator (FATES)
This is a self-study session. Please work through the materials on your own, and ask the instructors for help if you get stuck or have any questions!
| Tutorial: | Functionally Assembled Terrestrial Ecosystem Simulator (FATES) |
| Material: |
GTN Slides GTN Tutorial |
| Support: |
Instructor
Functionally Assembled Terrestrial Ecosystem Simulator (FATES)
This is a self-study session. Please work through the materials on your own, and ask the instructors for help if you get stuck or have any questions!
| Tutorial: | Functionally Assembled Terrestrial Ecosystem Simulator (FATES) |
| Material: |
GTN Slides |
| Support: |
Instructor
Genome Assembly of MRSA using Oxford Nanopore MinION Data
This is a self-study session. Please work through the materials on your own, and ask the instructors for help if you get stuck or have any questions!
| Tutorial: | Genome Assembly of MRSA using Oxford Nanopore MinION Data |
| Description: | This tutorial will cover X |
| Material: | GTN Tutorial |
| Support: |
Instructor
My External Session
This is a training that is not in the GTN, but it will teach you about XYZ
Speaker
Note: This is a training session outside of the GTN. Please contact the authors if you have questions.
Wrap-up
Thanks for joining this course!
Let us know what you thought of this course!
Please share your thoughts, suggestions, complaints and compliments with us in one of the following ways:
- About this event: Please fill out this Feedback Form to help us improve this event in the future!
- About the Materials (slides, training manuals): use the feedback forms at the end of the tutorial on the GTN website.
- Anything else? - Let us know in Slack (##event-testevent )
Request a certificate of attendance.
For this event, we will use the GTN Certificate Slack Bot to keep track of your progress and request your certificate. (Instructions below).
NOTE: If your country blocks Slack, then please fill in this Certificate Request Form instead.
Deadline: no later than Sunday July 24, 2022.
Certificate Requirements
- Have a registration for this event.
- Save all your Galaxy Histories.
- Register completion of tutorials using the Certificate Bot (see below).
- Answer the icebreakers question on Slack every day!
- Be active on Slack!
- Join the Slack channels for every training session you follow this week (see link below video)
- Let us know when you are starting with a session in the session's dedicated Slack channel
- Talk about the session! Get stuck? Have a question about the science? want to discuss anything? want to thank your instructors? do it in Slack!
- Whenever you finish a session, let us know what you thought of it!
- Enjoyed a tutorial? Take a moment to thank your (volunteer) instructors and speakers on Slack
- And please, feel free to help other participants on Slack if you know the answer!
- Fill out our feedback survey (see "wrap-up" section of the program). This will help us improve this event in the future.
NOTE: You can follow as few or as many training sessions as you want, we will give you a personalized certificate listing all the sessions you attended.
Using the GTN Certificate Slack Bot
- Completed a tutorial?
- Share your Galaxy history via URL
- Instructions
- The history URL will look something like:
https://usegalaxy.xx/u/saskia/h/my-history-name
- Open the Slack channel for the tutorial you finished
- The link to this channel is listed below the video
-
Submit your history URL in this channel using the command:
/completed https://link_to_your_history
- NOTE: Your message must START with /completed, you cannot write this in the middle or end of the message.
- NOTE: If a tutorial results in mulltiple histories, you can submit them all in the same command:
- example:
/completed history1_url history2_url- Write a short message in the channel letting us know what you thought of the tutorial, and/or thanking the instructors!
- Write a short message in the channel letting us know what you thought of the tutorial, and/or thanking the instructors!
- Share your Galaxy history via URL
- Want to check your submissions?
- At any time, use the /transcript command to see what you have already submitted
- In any channel, or a message to @GTN Certificate Bot
- Finished with the event? Use the command:
- /request-certificate
- to request a certificate for the course.
- Enter your name as you would like it to appear on the Certificate
- example:
/request-certificate Saskia Hiltemann
- example:
- In any channel, or a message to @GTN Certificate Bot
- We will review your Galaxy histories, and send you your personalised certificate
- We aim to do this within 2 weeks of the certificate deadline
- /request-certificate
Acknowledgements
This event was brought to you by..
Organiser Information
Remix this course in the course builder
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