Warning: Please be aware that these videos are a snapshot, and as such may use an outdated version of the tutorial and/or Galaxy. Below the video you will find links to the tutorials as they appeared at the time of recording.
metagenomics/metagenomics-assembly/tutorial
Below are video tutorials for this GTN material, created for various (past) events.
Video (May 2023)
Description:
In this tutorial, we will learn how to run metagenomic assembly tool and evaluate the quality of the generated assemblies.
To do that, we will use data from the study: Temporal shotgun metagenomic dissection of the coffee fermentation ecosystem.
For an in-depth analysis of the structure and functions of the coffee microbiome, a temporal shotgun metagenomic study
(six time points) was performed. The six samples have been sequenced with Illumina MiSeq utilizing whole genome sequencing.
Warning: Please be aware that these videos are a snapshot, and as such may use an outdated version of the tutorial and/or Galaxy. Below the video you will find links to the tutorials as they appeared at the time of recording.
