Analysis of Functions Expressed by Microbiomes
Speakers from across the world and instructors from Galaxy community will teach online courses on microbiome analysis through recorded videos and interactive resources.
Online Workshop at CSIR-IMTech - funded by American Society of Microbiology (ASM) and Indo-United States Science and Technology Forum (IUSSTF)
Practical Information
When: 15th-24th of November 2021
Support: Slack Channel (invite link), channel: event-functional-microbiome
Contact: Pratik Jagtap,
Organized by: CSIR-IMTech, The Gallantries Project, The Galaxy Training Network (GTN).
Format: Online, Microsoft Teams Access Link.
Program
Below you will find the full program for this event.
Some days will feature practical sessions, with video tutorials you can follow. Click the button below to see the tutorials.
Day 1 | November 15
| Time | Description | Speaker |
|---|---|---|
| 8:30 - 8:40 AM | Welcome | Manoj Kumar (CSIR-IMTech, Chandigarh) |
| 8:40 - 8:50 AM | Inauguration | Dr. Sanjeev Khosla (Director CSIR-IMTech, Chandigarh) |
| 8:50 - 9:00 AM | Introduction to the Course | Pratik Jagtap (University of Minnesota) |
| 9:05 - 10:00 AM | Introduction to Microbiome Research. | Robert Hettich (Oak Ridge National Laboratory) |
| 10:05 - 11:00 AM | Introduction to Galaxy Video Tutorials | Dave Clements & Pratik Jagtap |
| 11:15 AM - 3:00 PM | Galaxy Video Tutorials | GTN Instructors on Slack |
| 3:30 - 4:30 PM | Applications within Galaxy | Anshu Bharadwaj |
| 5:30 - 6:30 PM | Ice-Breaker (Interaction amongst attendees) | Attendees on GTN Slack |
| 6:30 - 7:30 PM | Q&A for Galaxy Tutorials | Subina Mehta & Saskia Hiltemann |
Microsoft Teams Access Link
Practical Session: Video Tutorials
Day 2 | November 16
| Time | Description | Speaker |
|---|---|---|
| 8:15-9:00 AM | Microbiome/Galaxy Kahoot! | |
| 9:05-10:00 AM | Metagenomics Lecture | Yogesh Shouche |
| 10:05-11:00 AM | Introduction to the Metagenomics video tutorials | Galaxy Australia Team |
| 11:15 AM-3:00 PM | Galaxy Video Tutorials | GTN Instructors on Slack |
| 3:30-4:00 PM | Introduce Talks for Week 2 | |
| 4:30-5:30 PM | Lecture | Manoj Kumar (CSIR-IMTech, Chandigarh) |
| 5:30-6:30 PM | Q&A for Metagenomics Tutorials | Bérénice Batut & Saskia Hiltemann |
Microsoft Teams Access Link
Practical Session: Video Tutorials
Day 3 | November 17
| Time | Description | Speaker |
|---|---|---|
| 8:15-9:00 AM | Metagenomics Kahoot! | |
| 9:05-10:00 AM | Metatranscriptomics Overview (video) Lecture | Berenice Batut |
| 10:05-11:00 AM | Introduction to the Metatranscriptomics Video Tutorials | Galaxy-P Team |
| 11:15 AM-3:00 PM | Galaxy Video Tutorials | GTN Instructors on Slack |
| 3:30-4:30 PM | Lecture | Sponsors |
| 5:30-6:30 PM | Q&A for Metatranscriptomics tutorials | Subina Mehta & Saskia Hiltemann |
Microsoft Teams Access Link
Practical Session: Video Tutorials
Day 4 | November 18
| Time | Description | Speaker |
|---|---|---|
| 8:15 - 9:00 AM | Metatranscriptomics Kahoot! | |
| 9:05 - 10:00 AM | Metaproteomics Overview Lecture | Nunn/Jagtap |
| 10:05-11:00 AM | Introduction to the Metaproteomics video tutorials | Galaxy-P Team |
| 11:15 AM-3:00 PM | Galaxy Video Tutorials | GTN Instructors on Slack |
| 3:30 - 4:30 PM | Lecture | Sponsors |
| 5:30 - 6:30 PM | Lecture on Meta-omics Analysis | Paul Wilmes |
| 6:30 - 7:30 PM | Q&A for Metaproteomics tutorials | Subina Mehta & Pratik Jagtap |
Microsoft Teams Access Link
Practical Session: Video Tutorials
Day 5 | November 19
| Time | Description | Speaker |
|---|---|---|
| 9:15 - 9:45 AM | Metaproteomics Kahoot! | |
| 10:05 - 10:30 AM | Week Wrap-up |
Microsoft Teams Access Link
Day 6 | November 22
| Time | Description | Speaker |
|---|---|---|
| 8:30-11:00 AM | Talks by participants | Access Link |
Microsoft Teams Access Link
Day 7 | November 23
| Time | Description | Speaker |
|---|---|---|
| 8:30-11:00 AM | Talks by participants | Access Link |
Microsoft Teams Access Link
Day 8 | November 24
| Time | Description | Speaker |
|---|---|---|
| 9:05 - 10:00 AM | Plenary Talk | Sharmila Mande |
| 10:05 - 11:00 AM | Results, conclusion and feedback form |
Microsoft Teams Access Link
Acknowledgements
Online Workshop at CSIR-IMTech - funded by American Society of Microbiology (ASM) and Indo-United States Science and Technology Forum (IUSSTF)
Organized with support from the Gallantries project and the Galaxy Training Network (GTN).
